Targeted metabolomics approach for identification of relapsing-remitting multiple sclerosis markers and evaluation of diagnostic models Full article
Journal |
MedChemComm
ISSN: 2040-2503 , E-ISSN: 2040-2511 |
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Output data | Year: 2019, Volume: 10, Number: 10, Pages: 1803-1809 Pages count : 7 DOI: 10.1039/c9md00253g | ||||||||
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Abstract:
Multiple sclerosis (MS) is an inflammatory autoimmune disease that causes demyelination of nerve cell axons. This paper is devoted to the study of relapsing-remitting multiple sclerosis (RRMS) biomarkers using an LC-MS/MS-based targeted metabolomics approach and the assessment of changes in the profile of 13 amino acids and 29 acylcarnitines in plasma during the relapse of the disease. A significant increase (p < 0.05) in the concentration of glutamate in plasma in patients with RRMS was detected, while the sum of leucine and isoleucine was reduced. A decrease in the concentration of decenoylcarnitine (C10:1, p < 0.05) was observed among acylcarnitines, and this metabolite was detected as a biomarker for the disease for the first time. Several models based on a single marker or multiple pre-selected markers and multivariate analysis with a dimension reduction technique were compared in their effectiveness for the classification of RRMS and healthy controls. The best results for cross-validation showed models of general linear regression (GLM, AUC = 0.783) and random forest model (RF, AUC = 0.769) based on pre-selected biomarkers. Validation of the models on the test set showed that the RF model based on selected metabolites was the most effective (AUC = 0.72). The results obtained are promising for further development of the system of clinical decision support for the diagnosis of RRMS based on metabolic data.
Cite:
Kasakin M.F.
, Rogachev A.D.
, Predtechenskaya E.V.
, Zaigraev V.J.
, Koval V.V.
, Pokrovsky A.G.
Targeted metabolomics approach for identification of relapsing-remitting multiple sclerosis markers and evaluation of diagnostic models
MedChemComm. 2019. V.10. N10. P.1803-1809. DOI: 10.1039/c9md00253g WOS Scopus РИНЦ
Targeted metabolomics approach for identification of relapsing-remitting multiple sclerosis markers and evaluation of diagnostic models
MedChemComm. 2019. V.10. N10. P.1803-1809. DOI: 10.1039/c9md00253g WOS Scopus РИНЦ
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Identifiers:
Web of science | WOS:000490887100009 |
Scopus | 2-s2.0-85073787187 |
Elibrary | 41713998 |
OpenAlex | W2967703846 |