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Targeted metabolomics approach for identification of relapsing-remitting multiple sclerosis markers and evaluation of diagnostic models Научная публикация

Журнал MedChemComm
ISSN: 2040-2503 , E-ISSN: 2040-2511
Вых. Данные Год: 2019, Том: 10, Номер: 10, Страницы: 1803-1809 Страниц : 7 DOI: 10.1039/c9md00253g
Авторы Kasakin Marat F. 1 , Rogachev Artem D. 2,3 , Predtechenskaya Elena V. 2,4 , Zaigraev Vladimir J. 2,4 , Koval Vladimir V. 1 , Pokrovsky Andrey G. 2
Организации
1 (Данные Web of science) Inst Chem Biol & Fundamental Med, Joint Ctr Genom Prote & Metabol Studies, Novosibirsk, Russia
2 (Данные Web of science) Novosibirsk State Univ, V Zelman Inst Med & Psychol, Novosibirsk, Russia
3 (Данные Web of science) NN Vorozhtsov Inst Organ Chem, Lab Physiologically Act Subst, Novosibirsk, Russia
4 (Данные Web of science) 2nd Novosibirsk Emergency Hosp, Dept Neurol, Novosibirsk, Russia

Реферат: Multiple sclerosis (MS) is an inflammatory autoimmune disease that causes demyelination of nerve cell axons. This paper is devoted to the study of relapsing-remitting multiple sclerosis (RRMS) biomarkers using an LC-MS/MS-based targeted metabolomics approach and the assessment of changes in the profile of 13 amino acids and 29 acylcarnitines in plasma during the relapse of the disease. A significant increase (p < 0.05) in the concentration of glutamate in plasma in patients with RRMS was detected, while the sum of leucine and isoleucine was reduced. A decrease in the concentration of decenoylcarnitine (C10:1, p < 0.05) was observed among acylcarnitines, and this metabolite was detected as a biomarker for the disease for the first time. Several models based on a single marker or multiple pre-selected markers and multivariate analysis with a dimension reduction technique were compared in their effectiveness for the classification of RRMS and healthy controls. The best results for cross-validation showed models of general linear regression (GLM, AUC = 0.783) and random forest model (RF, AUC = 0.769) based on pre-selected biomarkers. Validation of the models on the test set showed that the RF model based on selected metabolites was the most effective (AUC = 0.72). The results obtained are promising for further development of the system of clinical decision support for the diagnosis of RRMS based on metabolic data.
Библиографическая ссылка: Kasakin M.F. , Rogachev A.D. , Predtechenskaya E.V. , Zaigraev V.J. , Koval V.V. , Pokrovsky A.G.
Targeted metabolomics approach for identification of relapsing-remitting multiple sclerosis markers and evaluation of diagnostic models
MedChemComm. 2019. V.10. N10. P.1803-1809. DOI: 10.1039/c9md00253g WOS Scopus РИНЦ OpenAlex
Файлы: Полный текст от издателя
Идентификаторы БД:
Web of science: WOS:000490887100009
Scopus: 2-s2.0-85073787187
РИНЦ: 41713998
OpenAlex: W2967703846
Цитирование в БД:
БД Цитирований
Web of science 23
Scopus 21
OpenAlex 26
Альметрики: